Browse of TCMCG027C41220 protein

CDS

Accession Number	TCMCG027C41220
gbkey	CDS
Protein Id	XP_018837194.1
Location	join(28317584..28317607,28319173..28319246,28319370..28319509,28319622..28319708,28319894..28319981,28320065..28320145,28321614..28321691,28321814..28321893,28332873..28332951,28333057..28333386,28333788..28333847,28334587..28334830,28344144..28344413,28345608..28346978,28348563..28348818,28348895..28349027,28350793..28350880,28351030..28351108,28351618..28351913,28352737..28353844,28354330..28354701,28355819..28356429)
Gene	LOC109003491
GeneID	109003491
Organism	Juglans regia

Protein

Length	1982aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA350852
db_source	XM_018981649.2
Definition	mediator of RNA polymerase II transcription subunit 13 isoform X2 [Juglans regia]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACCAATGTTTTCAAACTTGGAGGCCTTCATCAAATATCATGGTTCCAGTTTCTTCCCCACGAAGCCGATTTGAGCTGTCTACCTGACAAAAGTGTGAAAGTAGAGCAGAAAGATACTGCTATGCTGTCGGTGCTTTCTTCGCATCTACAGTTGCAAAAGGAAGGATTTCTCAGCACATGGACCAATTCCTTTGTTGGGCCCTGGGATCCATCTCAAGGTCTGCACAATCCTGATGAGAAAATCAAGCTTTGGCTTTTTCTTCCTGGGCGTCATTCATCAGTTGTTGATACTGCTCAAAGTGCAGTCTCTAGATTAAGAGTAATTGCATCTGGAATATGGTTGGCTCCCGGAGACTCAGAAGAGGTTGCATCTGCCCTTTCACAGGCTTTAAGGAATTGTATAGAGAGAACACTTGCTGGACTTTCTTACGTGAGATTTGGAGATGTGTTTTCAAAGTATTGTCCATCACAAAGTGAGGAAATGTTCAGGAGAGGGCAACCTACTGTTGAGTTTGTCTTTGCTGCCACTGAAGAGGCAGTCTTTGTACATGCCATAATTTCGGCAAAGCATACCCGAACACTTTCAGGTGGAGATATTGAAGGAGCATTGCAGCGTTCTTCCAATAATTCGGGTTATAGACTTCCAGTGATTGTTTCTCCTCATGGGATTCGCGGTAGGCTCACTGGTTGTTGTCCCGGGGATCTTGTCAAACAAGTGTATTTATGTTCTGGCAAGTTTAAGACTCCAAATGGATTTATAGGTCTACCATATCATGTTTCGCAAGATGCTGGTTGCCAGATGAGGGGGCAAAGTTGCTATGTAGAAGTTACCCTGGGCTGCCCTAAATCTGTGAGTGACAATCCTTTGCAATCAAACTCGGATGCCATGAGGAATTTTCCCACAAATAATGTTCCCGAATCTGCTGATGTGGGAAGAGGTGATAAGAAAGGATCGCCAGATCAATTACCAGTTCATGAGAAAACATTCATATATCCAGCTGAGGCAGTGCTTGTTCCAGTCCTGCATACATCATTTGCCAGATCTTCTCTGAAAAGATTTTGGCTACAGAATTGGATAGGACCATCATTACCTGGTTCATGTTTCTTTATGCATTGTGGTAGCAATATGGACTTCGTTGAAGGATCATGGACTGAAATCAATGGAATACATGCCAAGCATGGCTATAATAGTAGTAGTAATAGTAACAGTAGCAGTATCAGCACCATAAGCAGCAGCTCTAGCGATAGTGATCACAAGATGACTACAGGAGCCAGTGAACTTGAGGGAGATGCTGACTCTTTAACGTGTAGACAATCTGGTTTATCTTCTAATCATCAGTTGGAGAATGGCCCCATATTGGGCTCTAAGCGTCCTCGAACTGGGATGACAGATTCATTTGGTCAAGTTGGTACAGAGACAAATGCTCTTGTGCAAGAAGCATACAAGTCTGATTTTATTTCCATGGAAGTTGACAATTCAGCCATAACAGGAGTTGCAAGTGAGCAGATTGGATCCGATTGGGATTGGGATGATGATGACAGAGGTATGGTCATGGATATCCAAGCTCTCCTCTCCGAGTTTGGAGATTTTGGGGACTTCTTCGAAAATGATGGCTTGCCTTTTGGGGAGCCCCCAGGAACTGCAGAATCACAGGCGCTTATGTTTTCTGCACCAGATTGTGGAGATGTGGGTCCCAGTCCAGTTGGGATGATGGATGTTTCTGATCAGGTGCTATTGCCTGTAGGCTTTCAATCCTTTGAGAGTTTTGATCCACCCCCTCCACTAGCCCAAGAGGAGTATCTCAGCAAAAGTCAAGAAGTAACAAATAACAGTTTGTCATCAGGTCTGGTGAACCACACTCCAGCATCCTCTACTGGTGAGTTCGATCATATAATAAAAGCTGAAGCGCTGTTGACTTTTGCTCCTGAATATGGAGCTGTGGAGACCCCCACAAGCGAGTTTTCGTCATCCATTTTCAGAAGCCCATATTTTCCAAAATCTCGAAGAGAGGAGAGTTCCAATTCAAGCTCAAATAATTACATCTATGGTGCAACACCACCCTCTTCTCCTTGCTTTGATGGATCAGATGAAAAGACTAGCCTGCCCATTAACTCAAAACCATTGTCTGGAAGGAATGATGTGAATGCTGTTGTCCACTCAAAAAAATATTACACTCATGTGGAAAGGGGGAAAGAGAGACATGATAAAAGATTTCTTGCAGGTAATAATAGTGTTGCTATGTCTGAGGGGGTGGCACCAACTCCATTCTCTAGTTTAAACTCTACAAATGCTGTTAAATCTTCCCTGAGAAAAGTGTCTGAAGGCACCCTTGAATTGGCACCTTTCCTTCAGTCTACGAGGACCGTGTTTGCAACTGAAGTTGAATGTCTGATGTTCCAGGCCTCCATGTGCAGGATAAGGCACACACTATTATCTTCCAGTACCTCTATGCCTATTAATTTGAGTAGGTTAACTGGAAGTAATGTTTTTAATCAGCTGCCTGGTGACCAAAGTACATTGACGGACAATACATCTAGCAAGTATGAGGTGAAAAAGAAAGAGACCATACCAATTAGAATAGCTGGTGATACTGATGGAATTCTAGATGGGCATCTTAATGCGCCTGTTGGTGTTTGGCGCTCTGTTGGAGTTCCTAAAGTTCCGAAGCTCTCAAACTCACCAAGTATGGAAATTAGTCCATCCTTACCTCATAATTCGTTCAATGAGGAAGCTATCCTTTCTTTTGGACAAATGCAACCTCTTCAGGAGCTTCTTGATGGAATGGCATTACTTGTCCAACAAGCTACATCCTCTGTTGATCTGACCCTTGATGGGGATTGTGGTGATGGTGCTTATGGTTGGCTTGCGTTACAAGAGCAGTGGAAGCGGGGATTTTCTTGTGGACCTTTTATGATGCATGCTGGTTGTGGGGGGACTTTGGCTTCTTGTCATGCACTTGACATTGCTGGTGTGGAGTTAGTGGATCCACTTTCAGCTGATGTTCACGCTTCGTCTGTGATTAATTTGTTGCAGTCTGACATAAAGACAGCCTTAAAATCTGCTTTCAGTATTTTGGATGGTCCATTGTCTGTCAATGATTGGTGCAAAGGCCGCAATCCATCAGTTGATGCTGGAAGCACGGGTGATGGATTTTCTGCCGAGTCTTCTATAAGTGAATGCAGAGATTCTTCCAGTACTGTTGGAGAACCAATGAGCCCATCTCAGTCTTCTGCTGGTGGATCATCTTCTCTTAAAGATAGAGCAAAAGTGGATGAGACATGCCAAAGGAGATCTAACCAAGAAATCTGTGCCTCAGAGTCAGAGCAGCAACAAAGCACCCGGCTAAGACCAACACTTCTTGTTCTTCCTTTGCCTGCTATACTTGTTGGGTACCAGGATGATTGGCTTAAGACGTCTGCAAGCTCCTTGCAACTTTGGGAGAAGGCTCCTCTTGAACCATACGCATTACAGAAACCTATTACTTACAATGTTATATGTCCAGACATTGATCCACTAACTTCTGCTGCTGCTGATTTTTTCCAGCAACTTGGAACTGTCTATGAGACGTGTAAACTGGGTAGTCATTCACCACAAAGTTTGGGCAACCAAATGGAAATCGATTCAGCAAAATGGTCATCTTCTGGTTTTGTTCTACTTGATTGTCCTCAGTCAATGAAGATAGAAAGTAGTAACGCATCTCTTGTGGGCTCAATAAGCGATTATTTTCTCTCTCTTTCCAATGGTTGGGACTTGACAAGCTATCTTAAGTCCCTTTCAAAGGCACTAAAAGGCTTGAAACTTGGTCCATGCTCGTCCACAAACCCAAAAGAAGGAAGCAGTGGTCCTTGTATGGTAATATATGTGGTGTGCCCCTTCCCTGAGCCTACTGCAGTTCTACAAACTGTTGTTGAGTCTTCTGTTGCTGTTGGATCAGTCATTCTCCAGTCAGATAGGGAGAGAAGATCTATATTGCACAGTCAGGTTGGGAAGGCTTTAAGCTGCTCAGCAGCAGTGGATGAAGCAACCATATCAAACATTTTAGTACTTTCAGGGTTTAGTATTCCTAAATTGGTACTGCAGATTGTGACAGTTGATGCCATTTTTAGAGTTACAAGTCCATCACTGAATGAGCTTGTCATTCTTAAGGAGACTGCCTTCACTGTTTATAACAAGGCTCGTCGAATTTCTCGAGGATCCTCTAATGACATGGTCCAGTCATCATCAATATCTAGCAGATCTCCCTCGGTCCTGACACAAATGTCTTCTCCTATGTCAGGGATGTGGAAGGACTGTGTGGGTCCCCGAATTACTGGGCATTCCCTTCCCAGAGAGGGTGAAATCGATGCTAGCCTGAGGAATAATTCTTGGGATAATTCTTGGCAGACTAGGACTGGAGGTTTAAGTTGTGATCCAATTAGAACAGGGGATTATACAGTTCAAGATGAAATTCGTTACATGTTTGAACCTCTTTTTATTCTTGCAGAACCTGGTTCCGTAGAGAATGGAGTTTCACCAGTGTTTTCTGGTAATATAGTGTCAGAATCTACAAAGACATTGTCTGATGATAGTAGTGGAGGATTTATGCAGGGTGCAGGCTCAGCAGGAAGTGCAGACGCTGGATCATGCTCTCATCTTGATGGATCTGAAACTGATGGCTTTGGATCTAGCCATCAAAAGACTCCTCCAAGCCTACATTGTTGTTATGGGTGGACAGAGGATTGGCGTTGGCTTGTAAGCATCTGGACAGATTCAAGGGGAGAATTGCTCGACAGCCATGTATTCCCCTTTGGTGGAATCAGCAGTAGGCAGGACACGAAGGGTCTGCAATGTCTTTTTGTTCAAGTTCTGCAGCAGGGCTGTCAGATACTTCAGGCATGCTCTTCTCCTGATATCGGTGTTGCCAAACCTAGAGATTTTGTGATTGCGCGCATTGGGAGCTTCTTTGAACTTGAATACCTAGAGTGGCAGAAAGCCATCAATTCAGTTGGAGGCTCTGAGGTAAAAAAATGGCCCTTGCAACTTCGACGATCTATGCGCGATGGAATTCCTGCGAGCAGTAATAGTACATCCTTACAGCAACAGGAGATGAGCTTGATTCAAGAGAGAACCCTACCTACCTCACCTAGTCCTTTGTATAACCCTCATGCTAAAGCAACTGGCTTTATAAAAGGTGGTTTAGGACAACCTGCTGCAAGGAAGCAGCTTATGGGTGGGCAGACACTAGTTGACAACTCAAGGGGCTTGCTTCAGTGGGTGCAGAGCATCAGTTTTGTTGCAATTTCAGTTGACCATTCTTTACATCTAGTTTTTCAAGCAGATTCACCATCTCCTGGAGGGGCTCAAGGGGGCAGTGGTATGGGACCATCTGGCTATCTTGAAGGGTTCACCCCAGTAAAGTCTCTTGGTTCTACGTCTGCTTCCTACGTTTTGATCCCATCACCTAGCATGCACTTTCTCCCTGCAACACCTCTTCAGCTCCCAATGTGCCTCACTGCAGAATCACCACCCCTGGCTCATCTCCTCCATAGCAAGGGCTCTGCAATTCCTCTTTCCACTGGTTTTGTAGTTTCAAAAGCCATACCTTCCATGAGGAAAGACTATAGAAGCAACTTGAAAGAAGAATGGCCTTCGGTTCTTTGTATAAATCTTATTGATTATTATGGAGGCACTAGCATTATCCAAGACAAAAGTGTTCGAGGTATTAATAAACAGGGAGGTAGAAGTTTAAGCTCTGAAGCTAAAGATTTCGAAATTGAGACCCATTTAGTTCTTGAGTCTGTTGCAGCAGAGCTTCATGCACTATCATGGATGACTGTTAGTCCAGCATACTTAGAGCGACGGACTGCATTGCCTTTCCACTGCGACATGGTTTTAAGACTGAGAAGGCTACTTCATTTTGCCGATAAAGAGCTCTCTCGGCAGCCAGGGAAATTGCATGTGTAG

Protein:   MWTNVFKLGGLHQISWFQFLPHEADLSCLPDKSVKVEQKDTAMLSVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVVDTAQSAVSRLRVIASGIWLAPGDSEEVASALSQALRNCIERTLAGLSYVRFGDVFSKYCPSQSEEMFRRGQPTVEFVFAATEEAVFVHAIISAKHTRTLSGGDIEGALQRSSNNSGYRLPVIVSPHGIRGRLTGCCPGDLVKQVYLCSGKFKTPNGFIGLPYHVSQDAGCQMRGQSCYVEVTLGCPKSVSDNPLQSNSDAMRNFPTNNVPESADVGRGDKKGSPDQLPVHEKTFIYPAEAVLVPVLHTSFARSSLKRFWLQNWIGPSLPGSCFFMHCGSNMDFVEGSWTEINGIHAKHGYNSSSNSNSSSISTISSSSSDSDHKMTTGASELEGDADSLTCRQSGLSSNHQLENGPILGSKRPRTGMTDSFGQVGTETNALVQEAYKSDFISMEVDNSAITGVASEQIGSDWDWDDDDRGMVMDIQALLSEFGDFGDFFENDGLPFGEPPGTAESQALMFSAPDCGDVGPSPVGMMDVSDQVLLPVGFQSFESFDPPPPLAQEEYLSKSQEVTNNSLSSGLVNHTPASSTGEFDHIIKAEALLTFAPEYGAVETPTSEFSSSIFRSPYFPKSRREESSNSSSNNYIYGATPPSSPCFDGSDEKTSLPINSKPLSGRNDVNAVVHSKKYYTHVERGKERHDKRFLAGNNSVAMSEGVAPTPFSSLNSTNAVKSSLRKVSEGTLELAPFLQSTRTVFATEVECLMFQASMCRIRHTLLSSSTSMPINLSRLTGSNVFNQLPGDQSTLTDNTSSKYEVKKKETIPIRIAGDTDGILDGHLNAPVGVWRSVGVPKVPKLSNSPSMEISPSLPHNSFNEEAILSFGQMQPLQELLDGMALLVQQATSSVDLTLDGDCGDGAYGWLALQEQWKRGFSCGPFMMHAGCGGTLASCHALDIAGVELVDPLSADVHASSVINLLQSDIKTALKSAFSILDGPLSVNDWCKGRNPSVDAGSTGDGFSAESSISECRDSSSTVGEPMSPSQSSAGGSSSLKDRAKVDETCQRRSNQEICASESEQQQSTRLRPTLLVLPLPAILVGYQDDWLKTSASSLQLWEKAPLEPYALQKPITYNVICPDIDPLTSAAADFFQQLGTVYETCKLGSHSPQSLGNQMEIDSAKWSSSGFVLLDCPQSMKIESSNASLVGSISDYFLSLSNGWDLTSYLKSLSKALKGLKLGPCSSTNPKEGSSGPCMVIYVVCPFPEPTAVLQTVVESSVAVGSVILQSDRERRSILHSQVGKALSCSAAVDEATISNILVLSGFSIPKLVLQIVTVDAIFRVTSPSLNELVILKETAFTVYNKARRISRGSSNDMVQSSSISSRSPSVLTQMSSPMSGMWKDCVGPRITGHSLPREGEIDASLRNNSWDNSWQTRTGGLSCDPIRTGDYTVQDEIRYMFEPLFILAEPGSVENGVSPVFSGNIVSESTKTLSDDSSGGFMQGAGSAGSADAGSCSHLDGSETDGFGSSHQKTPPSLHCCYGWTEDWRWLVSIWTDSRGELLDSHVFPFGGISSRQDTKGLQCLFVQVLQQGCQILQACSSPDIGVAKPRDFVIARIGSFFELEYLEWQKAINSVGGSEVKKWPLQLRRSMRDGIPASSNSTSLQQQEMSLIQERTLPTSPSPLYNPHAKATGFIKGGLGQPAARKQLMGGQTLVDNSRGLLQWVQSISFVAISVDHSLHLVFQADSPSPGGAQGGSGMGPSGYLEGFTPVKSLGSTSASYVLIPSPSMHFLPATPLQLPMCLTAESPPLAHLLHSKGSAIPLSTGFVVSKAIPSMRKDYRSNLKEEWPSVLCINLIDYYGGTSIIQDKSVRGINKQGGRSLSSEAKDFEIETHLVLESVAAELHALSWMTVSPAYLERRTALPFHCDMVLRLRRLLHFADKELSRQPGKLHV